IIabm/model.py

import agentpy as ap
import pandas as pd
import numpy as np
import networkx as nx
from firm import FirmAgent
from product import ProductAgent
from orm import db_session, Result
import platform
import json


class Model(ap.Model):
    def setup(self):
        self.sample = self.p.sample
        self.int_stop_times, self.int_stop_t = 0, None
        self.nprandom = np.random.default_rng(self.p.seed)
        self.int_n_iter = int(self.p.n_iter)

        self.dct_lst_remove_firm_prod = self.p.dct_lst_init_remove_firm_prod

        self.int_n_max_trial = int(self.p.n_max_trial)
        self.int_netw_sply_prf_size = int(self.p.netw_sply_prf_n)
        self.flt_netw_sply_prf_size = float(self.p.netw_sply_prf_size)
        self.str_cap_limit_prob_type = str(self.p.cap_limit_prob_type)
        self.flt_cap_limit_level = float(self.p.cap_limit_level)
        self.flt_diff_remove = float(self.p.diff_remove)
        self.proactive_ratio = float(self.p.proactive_ratio)

        # init graph bom
        G_bom = nx.adjacency_graph(json.loads(self.p.g_bom))
        self.product_network = ap.Network(self, G_bom)

        # init graph firm
        Firm = pd.read_csv("Firm_amended.csv")
        Firm['Code'] = Firm['Code'].astype('string')
        Firm.fillna(0, inplace=True)
        Firm_attr = Firm.loc[:, ["Code", "Name", "Type_Region", "Revenue_Log"]]
        firm_product = []
        for _, row in Firm.loc[:, '1':].iterrows():
            firm_product.append(row[row == 1].index.to_list())
        Firm_attr.loc[:, 'Product_Code'] = firm_product
        Firm_attr.set_index('Code', inplace=True)
        G_Firm = nx.MultiDiGraph()
        G_Firm.add_nodes_from(Firm["Code"])

        firm_labels_dict = {}
        for code in G_Firm.nodes:
            firm_labels_dict[code] = Firm_attr.loc[code].to_dict()
        nx.set_node_attributes(G_Firm, firm_labels_dict)

        # init graph firm prod
        Firm_Prod = pd.read_csv("Firm_amended.csv")
        Firm_Prod.fillna(0, inplace=True)
        firm_prod = pd.DataFrame({'bool': Firm_Prod.loc[:, '1':].stack()})
        firm_prod = firm_prod[firm_prod['bool'] == 1].reset_index()
        firm_prod.drop('bool', axis=1, inplace=True)
        firm_prod.rename({'level_0': 'Firm_Code',
                          'level_1': 'Product_Code'}, axis=1, inplace=True)
        firm_prod['Firm_Code'] = firm_prod['Firm_Code'].astype('string')
        G_FirmProd = nx.MultiDiGraph()
        G_FirmProd.add_nodes_from(firm_prod.index)

        firm_prod_labels_dict = {}
        for code in firm_prod.index:
            firm_prod_labels_dict[code] = firm_prod.loc[code].to_dict()
        nx.set_node_attributes(G_FirmProd, firm_prod_labels_dict)

        # add edge to G_firm according to G_bom
        for node in nx.nodes(G_Firm):
            lst_pred_product_code = []
            for product_code in G_Firm.nodes[node]['Product_Code']:
                lst_pred_product_code += list(G_bom.predecessors(product_code))
            lst_pred_product_code = list(set(lst_pred_product_code))
            lst_pred_product_code = list(sorted(lst_pred_product_code))
            # print(lst_pred_product_code)
            for pred_product_code in lst_pred_product_code:
                # for each product predecessor (component) the firm need
                # get a list of firm producing this component
                lst_pred_firm = \
                    Firm['Code'][Firm[pred_product_code] == 1].to_list()
                print(lst_pred_firm)
                lst_pred_firm_size_damp = \
                    [G_Firm.nodes[pred_firm]['Revenue_Log'] **
                        self.flt_netw_sply_prf_size
                        for pred_firm in lst_pred_firm]
                lst_prob = \
                    [size_damp / sum(lst_pred_firm_size_damp)
                        for size_damp in lst_pred_firm_size_damp]
                # select multiple supplier (multi-sourcing)
                n_pred_firm = self.int_netw_sply_prf_size
                lst_choose_firm = self.nprandom.choice(lst_pred_firm,
                                                       n_pred_firm,
                                                       replace=False,
                                                       p=lst_prob)
                lst_add_edge = [(pred_firm, node,
                                {'Product': pred_product_code})
                                for pred_firm in lst_choose_firm]
                G_Firm.add_edges_from(lst_add_edge)

                # graph firm prod
                set_node_prod_code = set(G_Firm.nodes[node]['Product_Code'])
                set_pred_succ_code = set(G_bom.successors(pred_product_code))
                set_use_pred_prod_code = \
                    set_node_prod_code & set_pred_succ_code
                for pred_firm in lst_choose_firm:
                    pred_node = [n for n, v in G_FirmProd.nodes(data=True)
                                 if v['Firm_Code'] == pred_firm and
                                 v['Product_Code'] == pred_product_code][0]
                    for use_pred_prod_code in set_use_pred_prod_code:
                        current_node = \
                            [n for n, v in G_FirmProd.nodes(data=True)
                             if v['Firm_Code'] == node and
                             v['Product_Code'] == use_pred_prod_code][0]
                        G_FirmProd.add_edge(pred_node, current_node)

        nx.to_pandas_adjacency(G_Firm).to_csv('adj_g_firm.csv')
        nx.to_pandas_adjacency(G_FirmProd).to_csv('adj_g_firm_prod.csv')
        # unconnected node
        # for node in nx.nodes(G_Firm):
        #     if node.

        self.sample.g_firm = json.dumps(nx.adjacency_data(G_Firm))
        self.firm_network = ap.Network(self, G_Firm)
        self.firm_prod_network = G_FirmProd
        # import matplotlib.pyplot as plt
        # nx.draw(G_FirmProd)
        # plt.show()

        # init product
        for ag_node, attr in self.product_network.graph.nodes(data=True):
            product = ProductAgent(self, code=ag_node.label, name=attr['Name'])
            self.product_network.add_agents([product], [ag_node])
        self.a_lst_total_products = ap.AgentList(self,
                                                 self.product_network.agents)

        # init firm
        for ag_node, attr in self.firm_network.graph.nodes(data=True):
            firm_agent = FirmAgent(
                self,
                code=ag_node.label,
                name=attr['Name'],
                type_region=attr['Type_Region'],
                revenue_log=attr['Revenue_Log'],
                a_lst_product=self.a_lst_total_products.select([
                    code in attr['Product_Code']
                    for code in self.a_lst_total_products.code
                ]))
            for product in firm_agent.a_lst_product:
                # init extra capacity based on discrete uniform distribution
                assert self.str_cap_limit_prob_type in ['uniform', 'normal'], \
                    "cap_limit_prob_type other than uniform, normal"
                if self.str_cap_limit_prob_type == 'uniform':
                    extra_cap_mean = \
                        firm_agent.revenue_log / self.flt_cap_limit_level
                    extra_cap = self.nprandom.integers(extra_cap_mean-2,
                                                       extra_cap_mean+2)
                    extra_cap = 0 if round(extra_cap) < 0 else round(extra_cap)
                    # print(firm_agent.name, extra_cap)
                    firm_agent.dct_prod_capacity[product] = extra_cap
                elif self.str_cap_limit_prob_type == 'normal':
                    extra_cap_mean = \
                        firm_agent.revenue_log / self.flt_cap_limit_level
                    extra_cap = self.nprandom.normal(extra_cap_mean, 1)
                    extra_cap = 0 if round(extra_cap) < 0 else round(extra_cap)
                    # print(firm_agent.name, extra_cap)
                    firm_agent.dct_prod_capacity[product] = extra_cap

            self.firm_network.add_agents([firm_agent], [ag_node])
        self.a_lst_total_firms = ap.AgentList(self, self.firm_network.agents)

        # init dct_list_remove_firm_prod (from string to agent)
        t_dct = {}
        for firm_code, lst_product in self.dct_lst_remove_firm_prod.items():
            firm = self.a_lst_total_firms.select(
                self.a_lst_total_firms.code == firm_code)[0]
            t_dct[firm] = self.a_lst_total_products.select([
                code in lst_product for code in self.a_lst_total_products.code
            ])
        self.dct_lst_remove_firm_prod = t_dct
        self.dct_lst_disrupt_firm_prod = t_dct

        # init output
        self.lst_dct_lst_remove_firm_prod = []
        self.lst_dct_lst_disrupt_firm_prod = []

        # set the initial firm product that are removed
        for firm, a_lst_product in self.dct_lst_remove_firm_prod.items():
            for product in a_lst_product:
                assert product in firm.a_lst_product, \
                    f"product {product.code} not in firm {firm.code}"
                firm.a_lst_product_removed.append(product)

        # proactive strategy
        # get all the firm prod affected
        for firm, a_lst_product in self.dct_lst_remove_firm_prod.items():
            for product in a_lst_product:
                init_node = \
                    [n for n, v in
                     self.firm_prod_network.nodes(data=True)
                     if v['Firm_Code'] == firm.code and
                     v['Product_Code'] == product.code][0]
                dct_affected = \
                    nx.dfs_successors(self.firm_prod_network,
                                      init_node)
                lst_affected = set()
                for i, (u, vs) in enumerate(dct_affected.items()):
                    # at least 2 hops away
                    if i > 0:
                        pred_node = self.firm_prod_network.nodes[u]
                        for v in vs:
                            succ_node = self.firm_prod_network.nodes[v]
                            lst_affected.add((succ_node['Firm_Code'],
                                              succ_node['Product_Code']))
                lst_affected = list(lst_affected)
                lst_firm_proactive = \
                    [lst_affected[i] for i in
                     self.nprandom.choice(range(len(lst_affected)),
                                          round(len(lst_affected) *
                                                self.proactive_ratio))]

                for firm_code, prod_code in lst_firm_proactive:
                    pro_firm_prod_code = \
                        [n for n, v in
                         self.firm_prod_network.nodes(data=True)
                         if v['Firm_Code'] == firm_code and
                         v['Product_Code'] == prod_code][0]
                    pro_firm_prod_node = \
                        self.firm_prod_network.nodes[pro_firm_prod_code]
                    pro_firm = \
                        self.a_lst_total_firms.select(
                            [firm.code == pro_firm_prod_node['Firm_Code']
                             for firm in self.a_lst_total_firms])[0]
                    lst_shortest_path = \
                        list(nx.all_shortest_paths(self.firm_prod_network,
                                                   source=init_node,
                                                   target=pro_firm_prod_code))

                    dct_drs = {}
                    for di_supp_code in self.firm_prod_network.predecessors(
                            pro_firm_prod_code):
                        di_supp_node = \
                            self.firm_prod_network.nodes[di_supp_code]
                        di_supp_prod = \
                            self.a_lst_total_products.select(
                                [product.code == di_supp_node['Product_Code']
                                 for product in self.a_lst_total_products])[0]
                        di_supp_firm = \
                            self.a_lst_total_firms.select(
                                [firm.code == di_supp_node['Firm_Code']
                                 for firm in self.a_lst_total_firms])[0]
                        lst_cand = self.model.a_lst_total_firms.select([
                            di_supp_prod in firm.a_lst_product
                            and di_supp_prod not in firm.a_lst_product_removed
                            for firm in self.model.a_lst_total_firms
                        ])
                        n2n_betweenness = \
                            sum([True if di_supp_code in path else False
                                 for path in lst_shortest_path]) \
                            / len(lst_shortest_path)
                        drs = n2n_betweenness / \
                            (len(lst_cand) * di_supp_firm.revenue_log)
                        dct_drs[di_supp_code] = drs
                    dct_drs = dict(sorted(
                        dct_drs.items(), key=lambda kv: kv[1], reverse=True))
                    for di_supp_code in dct_drs.keys():
                        di_supp_node = \
                            self.firm_prod_network.nodes[di_supp_code]
                        di_supp_prod = \
                            self.a_lst_total_products.select(
                                [product.code == di_supp_node['Product_Code']
                                 for product in self.a_lst_total_products])[0]
                        # find a dfferent firm can produce the same product
                        lst_cand = self.model.a_lst_total_firms.select([
                            di_supp_prod in firm.a_lst_product
                            and di_supp_prod not in firm.a_lst_product_removed
                            and firm.code != di_supp_node['Firm_Code']
                            for firm in self.model.a_lst_total_firms
                        ])
                        if len(lst_cand) > 0:
                            select_cand = self.nprandom.choice(lst_cand)
                            self.firm_network.graph.add_edges_from([
                                (self.firm_network.positions[select_cand],
                                 self.firm_network.positions[pro_firm], {
                                    'Product': di_supp_prod.code
                                })
                            ])
                            print(f"proactive add {select_cand.code} to "
                                  f"{pro_firm.code} "
                                  f"for {di_supp_node['Firm_Code']} "
                                  f"{di_supp_node['Product_Code']}")
                            # change capacity
                            select_cand.dct_prod_capacity[di_supp_prod] -= 1
                            break

        nx.to_pandas_adjacency(G_Firm).to_csv('adj_g_firm_proactive.csv')
        # draw network
        # self.draw_network()

    def update(self):
        self.a_lst_total_firms.clean_before_time_step()
        # output
        self.lst_dct_lst_remove_firm_prod.append(
            (self.t, self.dct_lst_remove_firm_prod))
        self.lst_dct_lst_disrupt_firm_prod.append(
            (self.t, self.dct_lst_disrupt_firm_prod))

        # stop simulation if reached terminal number of iteration
        if self.t == self.int_n_iter or len(
                self.dct_lst_remove_firm_prod) == 0:
            self.int_stop_times = self.t
            self.stop()

    def step(self):
        # print('\n', '=' * 20, 'step', self.t, '=' * 20)
        # print(
        #     'dct_list_remove_firm_prod', {
        #         key.name: value.code
        #         for key, value in self.dct_lst_remove_firm_prod.items()
        #     })

        # remove_edge_to_cus_and_cus_up_prod
        for firm, a_lst_product in self.dct_lst_remove_firm_prod.items():
            for product in a_lst_product:
                firm.remove_edge_to_cus_remove_cus_up_prod(product)

        for n_trial in range(self.int_n_max_trial):
            # print('=' * 10, 'trial', n_trial, '=' * 10)
            # seek_alt_supply
            # shuffle self.a_lst_total_firms
            self.a_lst_total_firms = self.a_lst_total_firms.shuffle()
            for firm in self.a_lst_total_firms:
                if len(firm.a_lst_up_product_removed) > 0:
                    firm.seek_alt_supply()

            # handle_request
            # shuffle self.a_lst_total_firms
            self.a_lst_total_firms = self.a_lst_total_firms.shuffle()
            for firm in self.a_lst_total_firms:
                if len(firm.dct_request_prod_from_firm) > 0:
                    firm.handle_request()

            # reset dct_request_prod_from_firm
            self.a_lst_total_firms.clean_before_trial()
            # do not use:
            # self.a_lst_total_firms.dct_request_prod_from_firm = {} why?

        # based on a_lst_up_product_removed
        # update a_lst_product_disrupted / a_lst_product_removed
        # update dct_lst_disrupt_firm_prod / dct_lst_remove_firm_prod
        self.dct_lst_remove_firm_prod = {}
        self.dct_lst_disrupt_firm_prod = {}
        for firm in self.a_lst_total_firms:
            if len(firm.a_lst_up_product_removed) > 0:
                # print(firm.name, 'a_lst_up_product_removed', [
                #     product.code for product in firm.a_lst_up_product_removed
                # ])
                for product in firm.a_lst_product:
                    n_up_product_removed = 0
                    for up_product_removed in firm.a_lst_up_product_removed:
                        if product in up_product_removed.a_successors():
                            n_up_product_removed += 1
                    if n_up_product_removed == 0:
                        continue
                    else:
                        # update a_lst_product_disrupted
                        # update dct_lst_disrupt_firm_prod
                        if product not in firm.a_lst_product_disrupted:
                            firm.a_lst_product_disrupted.append(product)
                            if firm in self.dct_lst_disrupt_firm_prod.keys():
                                self.dct_lst_disrupt_firm_prod[firm].append(
                                    product)
                            else:
                                self.dct_lst_disrupt_firm_prod[
                                    firm] = ap.AgentList(
                                        self.model, [product])
                        # update a_lst_product_removed
                        # update dct_list_remove_firm_prod
                        # mark disrupted firm as removed based conditionally
                        lost_percent = n_up_product_removed / len(
                            product.a_predecessors())
                        lst_size = self.a_lst_total_firms.revenue_log
                        lst_size = [firm.revenue_log for firm
                                    in self.a_lst_total_firms
                                    if product in firm.a_lst_product
                                    and product
                                    not in firm.a_lst_product_removed
                                    ]
                        std_size = (firm.revenue_log - min(lst_size) +
                                    1) / (max(lst_size) - min(lst_size) + 1)
                        prob_remove = 1 - std_size * (1 - lost_percent)
                        # damp prod
                        prob_remove = prob_remove ** self.flt_diff_remove
                        # sample prob
                        prob_remove = self.nprandom.uniform(
                            prob_remove - 0.1, prob_remove + 0.1)
                        prob_remove = 1 if prob_remove > 1 else prob_remove
                        prob_remove = 0 if prob_remove < 0 else prob_remove
                        if self.nprandom.choice([True, False],
                                                p=[prob_remove,
                                                   1 - prob_remove]):
                            firm.a_lst_product_removed.append(product)
                            if firm in self.dct_lst_remove_firm_prod.keys():
                                self.dct_lst_remove_firm_prod[firm].append(
                                    product)
                            else:
                                self.dct_lst_remove_firm_prod[
                                    firm] = ap.AgentList(
                                        self.model, [product])

        # print(
        #     'dct_list_remove_firm_prod', {
        #         key.name: value.code
        #         for key, value in self.dct_lst_remove_firm_prod.items()
        #     })

    def end(self):
        # print('/' * 20, 'output', '/' * 20)
        # print('dct_list_remove_firm_prod')
        # for t, dct in self.lst_dct_lst_remove_firm_prod:
        #     for firm, a_lst_product in dct.items():
        #         for product in a_lst_product:
        #             print(t, firm.name, product.code)
        # print('dct_lst_disrupt_firm_prod')
        # for t, dct in self.lst_dct_lst_disrupt_firm_prod:
        #     for firm, a_lst_product in dct.items():
        #         for product in a_lst_product:
        #             print(t, firm.name, product.code)

        qry_result = db_session.query(Result).filter_by(s_id=self.sample.id)
        if qry_result.count() == 0:
            lst_result_info = []
            for t, dct in self.lst_dct_lst_disrupt_firm_prod:
                for firm, a_lst_product in dct.items():
                    for product in a_lst_product:
                        db_r = Result(s_id=self.sample.id,
                                      id_firm=firm.code,
                                      id_product=product.code,
                                      ts=t,
                                      is_disrupted=True)
                        lst_result_info.append(db_r)
            db_session.bulk_save_objects(lst_result_info)
            db_session.commit()
            for t, dct in self.lst_dct_lst_remove_firm_prod:
                for firm, a_lst_product in dct.items():
                    for product in a_lst_product:
                        # only firm disrupted can be removed theoretically
                        qry_f_p = db_session.query(Result).filter(
                            Result.s_id == self.sample.id,
                            Result.id_firm == firm.code,
                            Result.id_product == product.code)
                        if qry_f_p.count() == 1:
                            qry_f_p.update({"is_removed": True})
                            db_session.commit()
        self.sample.is_done_flag = 1
        self.sample.computer_name = platform.node()
        self.sample.stop_t = self.int_stop_times
        db_session.commit()

    def draw_network(self):
        import matplotlib.pyplot as plt
        plt.rcParams['font.sans-serif'] = 'SimHei'
        pos = nx.nx_agraph.graphviz_layout(self.firm_network.graph,
                                           prog="twopi",
                                           args="")
        node_label = nx.get_node_attributes(self.firm_network.graph, 'Name')
        node_degree = dict(self.firm_network.graph.out_degree())
        node_label = {
            key: f"{key} {node_label[key]} {node_degree[key]}"
            for key in node_label.keys()
        }
        node_size = list(
            nx.get_node_attributes(self.firm_network.graph,
                                   'Revenue_Log').values())
        node_size = list(map(lambda x: x**2, node_size))
        edge_label = nx.get_edge_attributes(self.firm_network.graph, "Product")
        # multi(di)graphs, the keys are 3-tuples
        edge_label = {(n1, n2): label
                      for (n1, n2, _), label in edge_label.items()}
        plt.figure(figsize=(12, 12), dpi=300)
        nx.draw(self.firm_network.graph,
                pos,
                node_size=node_size,
                labels=node_label,
                font_size=6)
        nx.draw_networkx_edge_labels(self.firm_network.graph,
                                     pos,
                                     edge_label,
                                     font_size=4)
        plt.savefig("network.png")